Bird Mortality Research Articles

Tracking data highlight the importance of human-induced mortality for large migratory birds at a flyway scale

Human-induced direct mortality affects huge numbers of birds each year, threatening hundreds of species worldwide. Tracking technologies can be an important tool to investigate temporal and spatial patterns of bird mortality as well as their drivers. We compiled 1704 mortality records from tracking studies across the African-Eurasian flyway for 45 species, including raptors, storks, and cranes, covering the period from 2003 to 2021. Our results show a higher frequency of human-induced causes of mortality than natural causes across taxonomic groups, geographical areas, and age classes. Moreover, we found that the frequency of human-induced mortality remained stable over the study period. From the human-induced mortality events with a known cause (n = 637), three main causes were identified: electrocution (40.5 %), illegal killing (21.7 %), and poisoning (16.3 %). Additionally, combined energy infrastructure-related mortality (i.e., electrocution, power line collision, and wind-farm collision) represented 49 % of all human-induced mortality events. Using a random forest model, the main predictors of human-induced mortality were found to be taxonomic group, geographic location (latitude and longitude), and human footprint index value at the location of mortality. Despite conservation efforts, human drivers of bird mortality in the African-Eurasian flyway do not appear to have declined over the last 15 years for the studied group of species. Results suggest that stronger conservation actions to address these threats across the flyway can reduce their impacts on species. In particular, projected future development of energy infrastructure is a representative example where application of planning, operation, and mitigation measures can enhance bird conservation.

Laying date depends on territorial breeders’ age, climatic conditions and previous breeding success: a long-term study (2004–2021) with Bonelli’s eagle in Spain

AbstractAdjustment of reproductive timing within the annual cycle is a crucial issue for both offspring and parents’ survival, and breeding success. Early laying date is closely related to successful breeding outcome and better survival. Obtaining long datasets on threatened long-lived species’ breeding performance can contribute to their conservation. Using field observations and telemetry information, here we analyse how laying date of an endangered long-lived raptor varies with nest characteristics, individual factors and climatic variables during an 18-year (2004–2021) study period in eastern Spain. To this end, we estimated how environmental and individual variables affect laying date. Our results showed that average laying date in our study area took place on February 17th. Laying date showed no trend during the study period. Nests placed in higher elevations showed delayed laying dates. Territories occupied by adults with previous successful experience and high brood size showed earlier laying dates. Current year laying date was highly correlated with previous year laying date. Colder territories delayed laying date and the minimum temperature of the previous December were negatively correlated to previous laying date. Our results highlight the importance of experienced birds able to adjust timing of reproduction to maximise biological fitness. High adult mortality allows sub-adults to settle as breeders and jeopardises species’ persistence. Therefore, the reduction of mortality of territorial birds is of the outmost importance to improve the conservation status of declining long-lived species such as the Bonelli’s eagle (Aquila fasciata).

Pacific and Atlantic sea lion mortality caused by highly pathogenic Avian Influenza A(H5N1) in South America

We describe the evolution of the outbreak of Highly Pathogenic Avian Influenza (HPAI) A(H5N1) in sea lions (Otaria flavescens) of South America. At least 24,000 sea lions died in Peru, Chile, Argentina, Uruguay, and Brazil between January–October 2023. The most plausible route of infection is cohabiting with or foraging on infected birds. However, we urge a detailed evaluation of the sea lions actual source of infection given that the concomitant massive wild bird mortalities registered in the Pacific Ocean did not occur in the Atlantic Ocean.

Home range size of Tengmalm’s owl offspring during the post-fledging dependence period in Central and North Europe

A greater knowledge of the intrinsic and extrinsic factors of animal home range (HR) formation can help us to understand the fundamental biological issues underlying, for instance, movement patterns, habitat selection and survival. However, very little is known about the HRs of birds of prey fledglings, even though the post-fledging phase is recognised as crucial due to the high mortality of juvenile birds. We radio-tracked 138 Tengmalm’s owl (Aegolius funereus) fledglings from 43 broods to determine their HRs during the post-fledging dependence period and to investigate the factors affecting their sizes. The study was conducted during four breeding seasons in Czechia and two seasons in Finland. The mean fledglings’ HR size calculated according to the 95% IID Kernel Density Estimation method was 63.7 ± 43.9 ha (± SD; n = 71) during nocturnal activity and 52.0 ± 46.1 ha (n = 63) during diurnal roosting. The sizes of both nocturnal activity and diurnal roosting HRs increased with the longer individual duration of the post-fledging dependence period and also the higher rank of hatching within a brood. Diurnal roosting HRs were two times smaller in the Czech site, probably because of the very limited number of dense forest patches suitable for roosting as a legacy of the air pollution calamity in the 1970s, during which most coniferous stands died out. There was no difference in the size of nocturnal activity HR between the two study areas, although they differed markedly in terms of night length, altitude, weather, and forest age, structure and composition. This suggests that environmental factors are not decisive in determining the size of nocturnal activity HRs of Tengmalm’s owl fledglings. Since the diurnal HRs always occurred within the area of the nocturnal HRs, we suggest that conservation of the densest and preferably oldest forest stands within the areas of the study species occurrence may offer straightforward conservation tasks for protecting Tengmalm’s owl fledglings and also other species.

Descriptive Epidemiology and Phylodynamics of the “First Wave” of an Outbreak of Highly Pathogenic Avian Influenza (H5N1 Clade 2.3.4.4b) in British Columbia and the Yukon, Canada, April to September 2022

Highly pathogenic avian influenza (HPAI) is a viral disease that causes significant rates of morbidity and mortality in domestic poultry and wild birds, with occasional spillover into mammals, including humans. Beginning in November 2021, Canada experienced its longest and largest outbreak of HPAI in history. A portion of this outbreak (H5N1, clade 2.3.4.4b) occurred in western Canada, specifically in British Columbia (B.C.) and the Yukon, between April 12 and September 11, 2022, which was classified as the “first wave” in this region. Wild birds and mammals identified through passive surveillance and suspect domestic poultry flocks were screened for avian influenza virus (AIV), typed H5 by qPCR, and positive cases were whole genome sequenced. Descriptive epidemiological and phylodynamic analyses were performed to: (1) understand the taxonomic and geographic extent of wild species involved; and (2) examine the origins and probable transmission networks of HPAI viruses introduced into B.C./Yukon by comparing local viruses with those circulating elsewhere in North America. This outbreak included 21 species of wild birds, 2 species of wild mammals, 4 commercial, and 12 domestic small flock infected premises. Canada geese (Branta canadensis) and bald eagles (Haliaeetus leucocephalus) were the most common wild species detected. We demonstrate that north-south avian migration via the Pacific Flyway is the probable route of multiple incursions into this region. Phylogenetic analysis of the hemagglutinin (HA) segment revealed that the B.C./Yukon viruses detected formed five distinct genetic clusters which were maintained across the whole genome. Although, the genome segments were predominantly Eurasian in origin, NP and PB2 segments from all samples, as well as NS and PB1 segments from Cluster 3, had North American origins. Overall, we demonstrate the utility of genomic epidemiology to inform HPAI transmission dynamics across Western Canada and discuss potential knowledge gaps that exist in passive surveillance strategies for HPAI.

Heavy migration traffic and bad weather are a dangerous combination: Bird collisions in New York City

Abstract Bird–building collisions account for 365–988 million bird fatalities every year in the United States alone. Understanding conditions that heighten collision risk is critical to developing effective strategies for reducing this source of anthropogenic bird mortality. Meteorological factors and regional migration traffic may increase collision rates but also may be difficult to disentangle from other effects. We used 5 years of bird collision counts in New York City to examine the influence of nocturnal weather conditions and bird migration traffic rates on collisions with buildings during spring and fall. We found that seasonally unfavourable winds and conditions that impede visibility are important factors that increase the rates of bird–building collisions during both seasons. Specifically, northerly and westerly winds and low visibility in the spring and southerly and westerly winds and low cloud ceiling height in the fall are associated with higher collision risks. Generally, these weather variables associated most strongly with increased collisions when nocturnal bird migration traffic was high, with the exception of low visibility in spring, which was predicted to triple collision rates compared to high visibility, independent of bird migration traffic. Synthesis and applications: Although legislation to turn off unnecessary nocturnal lighting for the entirety of the migration seasons may be an ultimate goal, a proximate goal invaluable for reducing collisions will be predicting which nights will be of highest risk and using this information to determine when mitigation efforts could be most effective.

Migration mortality in birds

Bird migration is one of the greatest wildlife spectacles, producing massive global changes in the distributions of birds twice each year. To understand the evolution of this phenomenon, it is important to know the costs of these journeys in terms of the mortality they impose. The use of mark/re‐sighting and tracking studies has now made it possible, for some bird species, to separate mortality during migration from mortality during stationary periods. This paper aims to assess this information, based mainly on 31 published studies, most of which concern long‐distance migrations of passerines, large waterfowl and raptors. Most of these studies revealed that mortality rates were greater during migration than at other times – in some species more than 20 times greater. Overall, on the basis of median values, mortality per unit time during autumn journeys was about 3.0 times greater than mortality during stationary periods, during spring journeys about 6.3 times greater, and during autumn and spring journeys combined 4.4 times greater. The greater overall mortality on spring journeys was largely associated with more adverse wind conditions in spring than in autumn. High mortality rates were especially evident in birds crossing large ecological barriers, such as the Sahara Desert or the Gulf of Mexico, and were higher in that part of their journey than when crossing more benign terrain. There was no increase in mortality during migration in the adults of some long‐lived species with high annual survival and predominantly overland journeys; for these birds, much larger samples of year‐round tracked individuals will be needed to reveal any seasonal variations in mortality. Within certain species, birds that travelled long distances experienced greater mortality over the journey than those that travelled short distances, but in other species no such relationship was found. In species in which adults and juveniles were followed over the same journey, juveniles showed greater mortality. To judge from other studies, this difference could be attributed to the inexperience of juveniles, their lower feeding rates and flight efficiency, greater vulnerability to hazards such as weather and predation, or more frequent navigational errors. Broadly speaking, the risks of migration vary with features of the birds themselves, with the terrain to be crossed and with weather at the time. It may be assumed that migration persists in the long term because the costs (in terms of associated mortality) are more than offset by the benefits of breeding and wintering in different areas (in terms of improved overall survival and breeding success). To provide further understanding of migration mortality, suggestions are made on the types of studies required and on how they could best be conducted.

Pathology, microbiology, and genetic diversity associated with Erysipelothrix rhusiopathiae and novel Erysipelothrix spp. infections in southern sea otters (Enhydra lutris nereis).

Erysipelothrix spp., including E. rhusiopathiae, are zoonotic bacterial pathogens that can cause morbidity and mortality in mammals, fish, reptiles, birds, and humans. The southern sea otter (SSO; Enhydra lutris nereis) is a federally-listed threatened species for which infectious disease is a major cause of mortality. We estimated the frequency of detection of these opportunistic pathogens in dead SSOs, described pathology associated with Erysipelothrix infections in SSOs, characterized the genetic diversity and antimicrobial susceptibility of SSO isolates, and evaluated the virulence of two novel Erysipelothrix isolates from SSOs using an in vivo fish model. From 1998 to 2021 Erysipelothrix spp. were isolated from six of >500 necropsied SSOs. Erysipelothrix spp. were isolated in pure culture from three cases, while the other three were mixed cultures. Bacterial septicemia was a primary or contributing cause of death in five of the six cases. Other pathology observed included suppurative lymphadenopathy, fibrinosuppurative arteritis with thrombosis and infarction, bilateral uveitis and endophthalmitis, hypopyon, petechia and ecchymoses, mucosal infarction, and suppurative meningoencephalitis and ventriculitis. Short to long slender Gram-positive or Gram-variable bacterial rods were identified within lesions, alone or with other opportunistic bacteria. All six SSO isolates had the spaA genotype-four isolates clustered with spaA E. rhusiopathiae strains from various terrestrial and marine animal hosts. Two isolates did not cluster with any known Erysipelothrix spp.; whole genome sequencing revealed a novel Erysipelothrix species and a novel E. rhusiopathiae subspecies. We propose the names Erysipelothrix enhydrae sp. nov. and Erysipelothrix rhusiopathiae ohloneorum ssp. nov. respectively. The type strains are E. enhydrae UCD-4322-04 and E. rhusiopathiae ohloneorum UCD-4724-06, respectively. Experimental injection of tiger barbs (Puntigrus tetrazona) resulted in infection and mortality from the two novel Erysipelothrix spp. Antimicrobial susceptibility testing of Erysipelothrix isolates from SSOs shows similar susceptibility profiles to isolates from other terrestrial and aquatic animals. This is the first description of the pathology, microbial characteristics, and genetic diversity of Erysipelothrix isolates recovered from diseased SSOs. Methods presented here can facilitate case recognition, aid characterization of Erysipelothrix isolates, and illustrate assessment of virulence using fish models.

Quantifying the Impact of Avian Influenza on the Northern Gannet Colony of Bass Rock Using Ultra-High-Resolution Drone Imagery and Deep Learning

Drones are an increasingly popular choice for wildlife surveys due to their versatility, quick response capabilities, and ability to access remote areas while covering large regions. A novel application presented here is to combine drone imagery with neural networks to assess mortality within a bird colony. Since 2021, Highly Pathogenic Avian Influenza (HPAI) has caused significant bird mortality in the UK, mainly affecting aquatic bird species. The world’s largest northern gannet colony on Scotland’s Bass Rock experienced substantial losses in 2022 due to the outbreak. To assess the impact, RGB imagery of Bass Rock was acquired in both 2022 and 2023 by deploying a drone over the island for the first time. A deep learning neural network was subsequently applied to the data to automatically detect and count live and dead gannets, providing population estimates for both years. The model was trained on the 2022 dataset and achieved a mean average precision (mAP) of 37%. Application of the model predicted 18,220 live and 3761 dead gannets for 2022, consistent with NatureScot’s manual count of 21,277 live and 5035 dead gannets. For 2023, the model predicted 48,455 live and 43 dead gannets, and the manual count carried out by the Scottish Seabird Centre and UK Centre for Ecology and Hydrology (UKCEH) of the same area gave 51,428 live and 23 dead gannets. This marks a promising start to the colony’s recovery with a population increase of 166% determined by the model. The results presented here are the first known application of deep learning to detect dead birds from drone imagery, showcasing the methodology’s swift and adaptable nature to not only provide ongoing monitoring of seabird colonies and other wildlife species but also to conduct mortality assessments. As such, it could prove to be a valuable tool for conservation purposes.

Morbidity and Mortality of Birds of Prey Admitted to Rehabilitation Centers for Barbed Wire Injuries, New Mexico, USA, 2016-2021.

Interest in the role of fences in wildlife movement and injuries is growing, especially in the western US, where many miles of barbed wire fences crisscross the landscape. However, literature is limited on the effect of barbed wire on avian populations. From 2016 to 2021, six New Mexico, USA, rehabilitation centers accepted 49 raptors injured by barbed wire. Eight species were represented; the majority were Great Horned Owls (Bubo virginianus). Other owls, buteos, and a single falcon were also affected. Most of the injured birds came from counties with low human population density. The injuries tended to be severe, and most birds died or were euthanized; 11 survived, and only eight birds were released. During the study period, barbed wire injuries accounted for over 12% of Great-horned Owl admissions to rehabilitation centers and 7% of all owl admissions. At one New Mexican wildlife rehabilitation center, raptors admitted for barbed wire-associated injuries were more likely to die or be euthanized compared with those admitted for other reasons. Given the welfare effects to these birds, more research is needed to determine whether wildlife-friendly fence modifications, such as a smooth top wire or rail, would mitigate injuries to birds of prey.

Has avian influenza virus H9 originated from a bat source?

Influenza A viruses are important pathogens that can cause diseases with high mortality in humans, animals, and birds; and wild birds are considered the primary reservoir of all subtypes in nature. After discovering the H9 influenza A viruses in bats, questions arose about their potential to serve as an additional natural reservoir and about the priority of the viral origin: Did the virus initially circulate in bats and then transmit to birds or vice versa? Influenza A viruses of the H9 subtype are of particular interest because fatal infections of humans caused by H5, H7, and H10 influenza viruses contained RNA segments from H9 viruses. Recently, a novel subtype of influenza A virus (H19) was reported and it was closely related to the H9 bat influenza A virus by its hemagglutinin structure. The genome of novel H19 has revealed a mixed characteristic genomic signature of both avian and bat influenza viruses. The time to most recent common ancestor (TMRCA) estimates have shown that the divergence time between the bat and avian H9-similar influenza virus occurred approximately at the end of the XVIII century. This article discusses the evolution and possible origin of influenza viruses of the H9 subtype isolated from bats and birds. The obtained data, along with the known data, suggest that the primary reservoir of the H9 influenza virus is wild birds, from which the virus was transmitted to bats. We hypothesize that the novel H19 could be a descendant of an intermediate influenza virus that was in the transition stage of spillover from avian to bat hosts.

Holo-analysis of the effects of xylo-oligosaccharides on broiler chicken performance

ABSTRACT 1. Xylo-oligosaccharides (XOS) stimulate proliferation of beneficial bacteria in the gastrointestinal tract of broiler chickens. This results in enhanced utilisation of dietary non-starch polysaccharides and increased production of valuable short-chain fatty acids. However, these positive effects do not always translate into improved bird productive performance, with inconsistent performance responses observed between bird trials. 2. A holo-analysis was conducted to determine the effects of supplementing XOS into broiler diets on bird feed intake, body weight gain, feed conversion and mortality. This was done by comparing the XOS supplemented treatment to the control treatment. A total of 53 studies which met the criteria for inclusion were used in the analysis. 3. The results showed that XOS had a notable positive impact on bird mortality; XOS reduced mortality by 0.69% for every 1% increment in the control group. XOS supplementation induced a positive effect on the feed conversion ratio (FCR). However, the efficacy of XOS at improving FCR was dependent on the efficiency of the control group (performance of the flock), and the concentration of total arabinoxylan, protein and phytase in the diet. There were insufficient data points to predict the effect of XOS on body weight and feed intake. 4. In conclusion, the holo-analysis revealed that supplementing XOS to broiler chicken diets reduces bird mortality. XOS can also improve FCR, but the scale of response is dependent on the diet composition and control flock performance. Additional studies are required to confirm the effects of XOS on body weight and feed intake.

Estimating mortality of small passerine birds colliding with wind turbines

As demand for renewable energy is rising, wind power development is rapidly growing worldwide. In its wake, conflicts arise over land use changes converting pristine nature into industrial power plants and its associated adverse biodiversity effects, crowned by one of the most obvious and deadly consequences: bird collisions. Most post-construction studies report low levels of avian mortality, but the majority of these studies are conducted primarily on larger birds. However, the diversity and abundance of small passerine birds are rarely reflected in the carcass surveys, although they in numeric proportion to their abundances should be the most numerous. The assumption that surveys find all carcasses seems thus rarely fulfilled and passerine mortality is likely to be grossly underestimated. We therefore designed an experiment with dummy birds to estimate mortality of small-bodied passerines and other small-bodied birds during post-construction surveys, tested in a medium-sized wind farm in western Norway. The wind farm was surveyed weekly during the migration periods by carcass survey teams using trained dogs to find killed birds. The dogs in the carcass surveys were more successful in locating the large than the small dummy birds (60–200 g), where they found 74% of the large dummy birds. Detecting the smaller category (5–24 g) was more demanding and the dogs only found 17% of the small dummy birds. Correcting the post-construction carcass survey outcome with the results from the experiment leads to an almost fourfold increase in estimated mortality rates, largely due to the low detection rate of the smallest category. The detection rates will naturally vary between wind farms, depending on the specific habitat characteristics, the efficiency of the carcass surveys and the search intervals. Thus, implementing a simple experiment with dummy birds to future post-construction surveys will produce more accurate estimates of the wind turbine mortality rates, and thus improve our understanding of the biodiversity effects of conforming to a more sustainable future.

Artificial light at night is a top predictor of bird migration stopover density

As billions of nocturnal avian migrants traverse North America, twice a year they must contend with landscape changes driven by natural and anthropogenic forces, including the rapid growth of the artificial glow of the night sky. While airspaces facilitate migrant passage, terrestrial landscapes serve as essential areas to restore energy reserves and often act as refugia—making it critical to holistically identify stopover locations and understand drivers of use. Here, we leverage over 10 million remote sensing observations to develop seasonal contiguous United States layers of bird migrant stopover density. In over 70% of our models, we identify skyglow as a highly influential and consistently positive predictor of bird migration stopover density across the United States. This finding points to the potential of an expanding threat to avian migrants: peri-urban illuminated areas may act as ecological traps at macroscales that increase the mortality of birds during migration.

Light wavelength and pulsing frequency affect avoidance responses of Canada geese.

Collisions between birds and aircraft cause bird mortality, economic damage, and aviation safety hazards. One proposed solution to increasing the distance at which birds detect and move away from an approaching aircraft, ultimately mitigating the probability of collision, is through onboard lighting systems. Lights in vehicles have been shown to lead to earlier reactions in some bird species but they could also generate attraction, potentially increasing the probability of collision. Using information on the visual system of the Canada goose (Branta canadensis), we developed light stimuli of high chromatic contrast to their eyes. We then conducted a controlled behavioral experiment (i.e., single-choice test) to assess the avoidance or attraction responses of Canada geese to LED lights of different wavelengths (blue, 483 nm; red, 631nm) and pulsing frequencies (steady, pulsing at 2 Hz). Overall, Canada geese tended to avoid the blue light and move towards the red light; however, these responses depended heavily on light exposure order. At the beginning of the experiment, geese tended to avoid the red light. After further exposure the birds developed an attraction to the red light, consistent with the mere exposure effect. The response to the blue light generally followed a U-shape relationship (avoidance, attraction, avoidance) with increasing number of exposures, again consistent with the mere exposure effect, but followed by the satiation effect. Lights pulsing at 2 Hz enhanced avoidance responses under high ambient light conditions; whereas steady lights enhanced avoidance responses under dim ambient light conditions. Our results have implications for the design of lighting systems aimed at mitigating collisions between birds and human objects. LED lights in the blue portion of the spectrum are good candidates for deterrents and lights in the red portion of the spectrum may be counterproductive given the attraction effects with increasing exposure. Additionally, consideration should be given to systems that automatically modify pulsing of the light depending on ambient light intensity to enhance avoidance.

Incidental mortality of seabirds in pollock trawl fishery in the northwestern part of the Bering Sea

Purpose of the work: Estimation of average annual number of seabirds that die as a result of lethal strikes with fishing gear in the specialized pollock trawl fishery by large-tonnage fleet in the West Bering Sea zone.Methods used: The article is based on materials collected by ornithologists on large freezer trawlers in the summer and autumn periods in 2020 and 2021. To record bird deaths we used inspection of warps, net sonar wire third cable, net trawl, codend during trawl retrieval and count of bird lethal collisions with fishing gear during observation sessions at all stages of fishing operations. The total mortality was estimated by extrapolating the mean catch-rates (number of dead birds per vessel day) to fishing efforts of large-tonnage fleet in the West Bering Sea zone in 2020 and 2021.Novelty: The annual average mortality of birds in large-scale trawling was determined for the first time for domestic fisheries and an expert assessment of its potential risk to populations of the catched species was carried outResults: The death of 203 birds was recorded during 139 vessel days. The total estimated mortality in fishing gear was 8,355 (CI 5259–11451) birds per year: 4,717 northern fulmars, 1,667 short-tailed shearwaters, 1,006 Laysan albatrosses, 822 black-legged kittiwakes, 48 slaty-backed gulls, 48 Vega gulls, and 47 red-legged kittiwakes. Comparison of these estimates with the global or regional number of birds suggests that mortality in fishing gear in 2020 and 2021 did not have a significant negative impact on the state of species (proportion of dead birds was 0.005–0.085% of their population estimates). Despite the regular presence of short-tailed albatrosses near trawlers in the Navarin area, no deaths in fishing gear were recorded.Practical significance: The results are necessary for the process of ecological certification of the specialized pollock trawl fishery in the West Bering Sea zone.

Studies on the response of House Sparrow Passer domesticus to artificial nest-boxes in rural Arakkonam and Nemili taluks, Vellore District, Tamil Nadu, India

This study evaluated the response of House Sparrows Passer domesticus to artificial nest-boxes installed in human dwellings in 30 villages in Arakkonam and Nemili taluks, Vellore District, Tamil Nadu between February and July 2019, with help of school students who installed 245 artificial nest-boxes in their houses. House Sparrows attempted to build nests in 32 nest-boxes by frequent visits, built partial nests in 51, and built active nests followed by successful breeding in 32 nest-boxes; there was no response to the remaining 130. A significant relationship was detected between the type of house and the adoption of boxes by the birds. The maximum response was seen in tiled houses, followed by concrete and thatched houses. House Sparrows preferred nest-boxes placed at heights between 3 and 4 m. At the end of the breeding season, a total of 80 chicks successfully emerged from 32 active nests. Some mortality in adult birds due to ceiling fans and predatory animals such as House Crows and Domestic Cats was reported. Active nests in nest-boxes and birds were found in villages where mobile phone towers were installed. Of 32 active nests enumerated in nest-boxes, 22 were found within a 500 m radius of mobile phone towers, two from 500–1,000 m and eight from 1,000–2,000 m. Further study is planned to examine the relationship between mobile towers and nest site selection by sparrows. A survey done through a questionnaire reveals that 95% of residents were aware of and concerned about the declining populations of House Sparrow.

The episodic resurgence of highly pathogenic avian influenza H5 virus.

Highly pathogenic avian influenza (HPAI) H5N1 activity has intensified globally since 2021, increasingly causing mass mortality in wild birds and poultry and incidental infections in mammals1-3. However, the ecological and virological properties that underscore future mitigation strategies still remain unclear. Using epidemiological, spatial and genomic approaches, we demonstrate changes in the origins of resurgent HPAI H5 and reveal significant shifts in virus ecology and evolution. Outbreak data show key resurgent events in 2016-2017 and 2020-2021, contributing to the emergence and panzootic spread of H5N1 in 2021-2022. Genomic analysis reveals that the 2016-2017 epizootics originated in Asia, where HPAI H5 reservoirs are endemic. In 2020-2021, 2.3.4.4b H5N8 viruses emerged in African poultry, featuring mutations altering HA structure and receptor binding. In 2021-2022, a new H5N1 virus evolved through reassortment in wild birds in Europe, undergoing further reassortment with low-pathogenic avian influenza in wild and domestic birds during global dissemination. These results highlight a shift in the HPAI H5 epicentre beyond Asia and indicate that increasing persistence of HPAI H5 in wild birds is facilitating geographic and host range expansion, accelerating dispersion velocity and increasing reassortment potential. As earlier outbreaks of H5N1 and H5N8 were caused by more stable genomic constellations, these recent changes reflect adaptation across the domestic-bird-wild-bird interface. Elimination strategies in domestic birds therefore remain a high priority to limit future epizootics.

High number of HPAI H5 virus infections and antibodies in wild carnivores in the Netherlands, 2020–2022

ABSTRACT In October 2020, a new lineage of a clade 2.3.4.4b HPAI virus of the H5 subtype emerged in Europe, resulting in the largest global outbreak of HPAI to date, with unprecedented mortality in wild birds and poultry. The virus appears to have become enzootic in birds, continuously yielding novel HPAI virus variants. The recently increased abundance of infected birds worldwide increases the probability of bird–mammal contact, particularly in wild carnivores. Here, we performed molecular and serological screening of over 500 dead wild carnivores and sequencing of RNA positive materials. We show virological evidence for HPAI H5 virus infection in 0.8%, 1.4%, and 9.9% of animals tested in 2020, 2021, and 2022 respectively, with the highest proportion of positives in foxes, polecats and stone martens. We obtained near full genomes of 7 viruses and detected PB2 amino acid substitutions known to play a role in mammalian adaptation in three sequences. Infections were also found in without neurological signs or mortality. Serological evidence for infection was detected in 20% of the study population. These findings suggests that a high proportion of wild carnivores is infected but undetected in current surveillance programmes. We recommend increased surveillance in susceptible mammals, irrespective of neurological signs or encephalitis.

THE PHARMACOKINETICS AND PHARMACODYNAMICS OF ORAL PONAZURIL IN THE TREATMENT OF SYSTEMIC ISOSPOROSIS IN PASSERINE BIRDS.

Systemic isosporosis, previously atoxoplasmosis, is a significant cause of mortality in juvenile passerine birds. Recommended treatment regimens are empiric and vary in efficacy. The goal of this study was to determine the pharmacokinetics and pharmacodynamics of ponazuril for treatment of systemic isosporosis. Ponazuril, diluted with water to create an oral suspension (50 mg/ml), was administered (100 mg/kg) to 72 European starlings (Sturnus vulgaris) by a single dose via direct oral gavage (n = 24), a single dose injected into superworm larvae (Zophobas morio; n = 24), or a daily dose mixed with commercial dog food to top-dress feed for 5 d (n = 24). Peak plasma concentrations were 5.84, 2.46, and 9.13 µg/ml for the direct gavage, injected larvae, and top-dressed feed groups, respectively. With repeated dosing, mean plasma concentrations from the top-dressed feed group were maintained between 8.12 to 13.11 µg/ml. Results suggested ponazuril at a dosage of 100 mg/kg administered via direct gavage or top-dressed feed, but not via injected larvae, would exceed the concentrations needed to inhibit merogony of other apicomplexan parasites in cell culture (5 µg/ml). To assess the pharmacodynamics of this dose, seven passerine birds, red-vented bulbuls (Pycnonotus cafer; n = 2), blue-grey tanager (Thraupis episcopus; n = 1), and red-capped cardinals (Paroaria gularis; n = 4), were identified as shedders of systemic Isospora spp. via fecal qPCR. Birds were then treated with ponazuril (100 mg/kg) daily on top-dressed feed for 14 d. Fecal shedding was assessed via qPCR for 6 wk from the initiation of treatment. Treatment was associated with reduction in proportions of fecal shedding during the treatment period and the week following treatment, but shedding resumed in all birds by the end of sampling. Results support that treatment of breeding birds with 100 mg/kg ponazuril could reduce the shedding of active oocysts and decrease risk of clinical infection in susceptible juveniles.